BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027D04LP1|AL428711
(882 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig628 1425 0.0
>3x_Contig628
Length = 1864
Score = 1425 bits (719), Expect = 0.0
Identities = 722/723 (99%)
Strand = Plus / Plus
Query: 1 agatggattagaagggtctatttctactttaaaggcatctttacattcgttccctacgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1137 agatggattagaagggtctatttctactttaaaggcatctttacattcgttccctacgtc 1196
Query: 61 gatagatctttggattgatatgttgaacgtttatctaacacataatcagaatgatagtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1197 gatagatctttggattgatatgttgaacgtttatctaacacataatcagaatgatagtga 1256
Query: 121 actgatacgaaaccagttcaggaaatgcgaatccctcgtgggatctcatttcctctcgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1257 actgatacgaaaccagttcaggaaatgcgaatccctcgtgggatctcatttcctctcgca 1316
Query: 181 cgatatttgggataagcacattgcatatgaaacaagactacagaactgggaaaacgtatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1317 cgatatttgggataagcacattgcatatgaaacaagactacagaactgggaaaacgtatt 1376
Query: 241 tgaggtgtacaaacaagtcatgcagcaacctttgcatcaatatgcaagatactacaccag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1377 tgaggtgtacaaacaagtcatgcagcaacctttgcatcaatatgcaagatactacaccag 1436
Query: 301 ctttaaggaattcttggaatatcacccagagtttgctaatagggaatcaagcatccattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1437 ctttaaggaattcttggaatatcacccagagtttgctaatagggaatcaagcatccattt 1496
Query: 361 ggataccacatttatttctaaccaggagaaggtgaacaaaatatggacatatgaatcaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1497 ggataccacatttatttctaaccaggagaaggtgaacaaaatatggacatatgaatcaca 1556
Query: 421 aataaaacagccatttttcaatatccctgagcttcccgagaatgagattcagaattggga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1557 aataaaacagccatttttcaatatccctgagcttcccgagaatgagattcagaattggga 1616
Query: 481 tgcttatctatctttcttaatcaacaacactgagttcagtacagaattaataaaatcgac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1617 tgcttatctatctttcttaatcaacaacactgagttcagtacagaattaataaaatcgac 1676
Query: 541 gtttgagagatgtttgattccatgtttaagatacgaatatttctggggagcctatattga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1677 gtttgagagatgtttgattccatgtttaagatacgaatatttctggggagcctatattga 1736
Query: 601 ctggactgaaaggacttttggtcccgaatgtacgttccccttgtttgaaagagcactccg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1737 ctggactgaaaggacttttggtcccgaatgtacgttccccttgtttgaaagagcactccg 1796
Query: 661 ggctcttcctgctgataataaatctttcaagcaaaaatacatcaaatatttggaaagtaa 720
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1797 ggctcttcctgctgataataaatctttgaagcaaaaatacatcaaatatttggaaagtaa 1856
Query: 721 tat 723
|||
Sbjct: 1857 tat 1859
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7227
Number of Sequences: 1807
Number of extensions: 7227
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 882
length of database: 10,358,551
effective HSP length: 16
effective length of query: 866
effective length of database: 10,329,639
effective search space: 8945467374
effective search space used: 8945467374
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)